Duke University Light Microscopy Core Facility - Publications from before 2004

Publications from before 2004

Kawaguchi, Y. et al. The deacetylase HDAC6 regulates aggresome formation and cell viability in response to misfolded protein stress. Cell115, 727-38 (2003).

Finn, A. J., Feng, G. & Pendergast, A. M. Postsynaptic requirement for Abl kinases in assembly of the neuromuscular junction. Nat Neurosci6, 717-23 (2003).

Irazoqui, J. E., Gladfelter, A. S. & Lew, D. J. Scaffold-mediated symmetry breaking by Cdc42p. Nat Cell Biol5, 1062-70 (2003).

Atchison, F. W., Capel, B. & Means, A. R. Pin1 regulates the timing of mammalian primordial germ cell proliferation. Development130, 3579-86 (2003).

Plattner, R. et al. A new link between the c-Abl tyrosine kinase and phosphoinositide signalling through PLC-gamma1. Nat Cell Biol5, 309-19 (2003).

Amore, G., Yavrouian, R.G., Peterson, K.J., Ransick, A., McClay, D.R., and Davidson, E.H. Spdeadringer, a sea urchin embryo gene required separately in skeletogenic and oral ectoderm regulatory gene networks. Dev. Biol. 261:55-81, 2003.

Angerer, L.M., Oleksyn, D., Logan, C.Y., McClay, D.R., Dale, L., and Angerer, R.C. A BMP pathway regulates cell fate allocation along the sea urchin animal-vegetal embryonic axis. Development 127:1105-1114, 2000.

Armbruster BN, Etheridge KT, Broccoli D & Counter CM (2003) A Putative Telomere Recruiting Domain in the Catalytic Subunit of Human Telomerase. Mol Cell Biol, 23:3237-46.

Atchison, F.W., Capel, B., and Means, A.R. Pin1 regulates the timing of mammalian primordial germ cell proliferation. Development, 130: 3579-86, 2003.

Berwin, B., Reed, R.C., and Nicchitta, C.V. Virally Induced Lytic Cell Death Elicits the Release of Immunogenic GRP94/gp96. J. Biol. Chem. 276: 21083-21088, 2001.

Berwin, B., Hart, J.P., Pizzo, S.V., and Nicchitta, C.V. Cutting edge: CD91-independent cross-presentation of GRP94(gp96)-associated peptides. J Immunol. 168:4282-6, 2002.

Berwin, B., Rosser, M.F., Brinker, K.G., and Nicchitta, C.V. Transfer of GRP94(Gp96)-Associated Peptides onto Endosomal MHC Class I Molecules. Traffic. 3:358-66, 2002.

Berwin, B., Hart, J.P., Rice, S., Gass, C., Pizzo, S.V., Post, S.R., and Nicchitta CV. Scavenger receptor-A mediates gp96/GRP94 and calreticulin internalization by antigen-presenting cells. EMBO J. 22, 6127-36, 2003.

Blanpied, T.A., Scott, D. and Ehlers, M.D. Dynamics of clathrin coats at specialized endocytic zones of dendrites and spines. Neuron 36, 435-49, 2002.

Bray, S. and Amrein, H. A putative Drosophila pheromone receptor expressed in male-specific taste neurons is required for efficient courtship. Neuron 39:1019-1029, 2003.

Brennan, J., Karl, J., and Capel, B. Divergent vascular mechanisms downstream of Sry establish the arterial system in the XY gonad. Developmental Biology 244: 418-428, 2002.

Brennan, J., Tilmann, C., Yao, H., and Capel, B. Pdgfra mediates testis cord organization and fetal Leydig cell development in the XY gonad. Genes and Development, 17:800-810, 2003.

Bretscher, A., Edwards, K., and Fehon, R.G. ERM proteins and Merlin: Integrators at the cell cortex. Nature Rev. Mol. Cell Biol., 3, 586-599, 2002.

Brinker, K.G., Martin, E., Borron, P., Mostaghel, E., Doyle, C. Harding, C.V., and Wright, J.R. Surfactant protein D acts as an opsonin to enhance antigen uptake and presentation by immature dendritic cells. Am. J. Physiol. 284, L232-41, 2001.

Colon-Ramos, D.A., Salisbury, J.L., Sanders, M.A., Shenoy, S.M., Singer, R.H., and Garcia-Blanco, M.A. Asymmetric distribution of nuclear pore complexes and the cytoplasmic localization of beta2-tubulin mRNA in Chlamydomonas reinhardtii. Dev Cell. 2003 Jun;4(6):941-52, 2003.

Courtney, K.D., Grove, M., Vandongen, H., Vandongen, A., LaMantia, A.-S., and Pendergast, A.M. Localization and phosphorylation of Abl-interactor proteins, Abi-1 and Abi-2, in the developing nervous system. Molecular and Cellular Neuroscience 16, 244-57, 2000.

Cox, D.N., Chao, A., and Lin, H. Piwi encodes a nuclear factor whose activity modulates the number and division rate of germline stem cells. Development 127: 503-514, 2000.

Davidson, E.H., Rast, J.P, Oliveri, P., Cameron, R.A., Ransick, A., Calestani, C., Yuh, Ch.-H., Minokawa, T., Amore, G., Hinman, V., Arenas-Mena, C., Otim, O., Brown, C.T., Livi, C., Lee P.-y., Revilla, R., Rust, A.G., Pan, Z.J., Schilstra, M., Clark, P.J., Arnone, M.I., Rowen, L., Cameron R.A., McClay, D.R., Hood, L.E., and Bolouri, H. A genomic network for Development. Science 295:1669-1678, 2002.

Davidson, E.H., Rast, J.P., Oliveri, P., Cameron, R.A., Ransick, A., Yuh, Ch.-H, Calestani, C., Amore, G., Hinman, V., Minokawa, T., Arenas-Mena, C., Otim, O., Brown, C.T., Livil, C., Lee, P.-y., Revilla, R., Clark, P.J., McClay, D.R., Arnone, M.I., Rowan, L., Hood, L.D., and Bolouri, H.A Provisional Regulatory Gene Network for Specification of Endomesoderm in the Sea Urchin Embryo. Dev. Biol. 246:162-190, 2002.

Davidson, E.H., McClay D.R., and Hood, L. Regulatory gene networks and the properties of the developmental process. PNAS 100: 1475-1480, 2003.

Driver, D.J., McHeyzer-Williams, L.J., Cool, M., Stetson, D.B., and McHeyzer-Williams, M.G. Development and maintenance of a B220- memory B cell compartment. J. Immunol. 167, 1393-1405, 2001.

Dunipace, L., Meister, S., McNealy, C. and Amrein, H. Spatially restricted expression of candidate taste receptors in the Drosophila gustatory system. Current Biology 11:822-835, 2001.

Genova, J., Jong, S., Camp, J.T., and Fehon, R.G. Functional analysis of Cdc42 in actin filament assembly, epithelial morphogenesis, and cell signaling during Drosophila development. Dev. Biol. 221, 181-194, 2000.

Genova, J. and Fehon, R.G. Neuroglian, Gliotactin, and the Na+/K+ ATPase are essential for septate junction function in Drosophila. J. Cell Biol. 161, 979-989, 2003.

Gross, J.M. and McClay, D.R. The Role of Brachyury (T) During Gastrulation Movements in the Sea Urchin, Lytechinus variegatus. Developmental Biology 239, 132-47, 2001.

Gross, J.M, Peterson, R.E., and McClay, D.R. LvTbx2/3, a T-box Family Transcription Factor Involved in Formation of the Oral/Aboral Axis of the Sea Urchin Embryo. Development 130: 1989-1999, 2003.

Guo, Y., Saloupis, P., Shaw, S.J., and Rickman, D.W. Engraftment of adult neural progenitor cells transplanted to rat retina injured by transient ischemia. Invest Ophthalmol Vis Sci. 44:3194-201, 2003.

Herbein, J.F. and Wright, J.R. Enhanced clearance of surfactant protein D during lipopolysaccharide-induced acute inflammation in rat lung. Am. J. Physiol. 281:L268-277, 2001.

Hubbert, C., Guardiola, A., Shao, R., Kawaguchi, Y., Ito, A., Nixon, A., Yoshida, M., Wang, X.F., and Yao, T.P. HDAC6 is a microtubule-associated deacetylase. Nature 417:455-458, 2002.

King, F.J., Szakmary, A., Cox, D.N., and Lin, H. Yb modulates the division of both germline and somatic stem cells through piwi- and hh-mediated mechanisms in the Drosophila ovary. Molecular Cell 7, 497-508., 2001.

LaJeunesse, D R., McCartney, B.M., and Fehon, R.G. A systematic screen for dominant second-site modifiers of Merlin/NF2 phenotypes reveals an interaction with blistered/DSRF and scribbler. Genetics 158, 667-679, 2001.

Maddala, R., Reddy, V.N., Epstein, D.L., and Rao, V. Growth factor induced activation of Rho and Rac GTPases and actin cytoskeletal reorganization in human lens epithelial cells. Molecular Vision. 9: 329-336, 2003.

Mathur, A., Truskey, G.A., and Reichert, W.M. Combining atomic force and total internal reflection fluorescence microscopy (ATM-TIRFM) to study apical to basal force transmission in endothelial cells. Biophys. J. 78: 1725-1735, 2000.

McCartney, B.M, Kulikauskas, R., LaJeunesse, D.L., and Fehon, R.G. The Neurofibromatosis-2 homologue, Merlin, and the Drosophila tumor suppressor expanded function together to regulate cell proliferation and differentiation. Development 127, 1315-1324, 2000.

McClay, D.R. and Hertzler, P.H. Quantitative measurement of cell adhesiveness. Current Protocols in Cell Biology. John Wiley, 1999.

McClay, D.R. The role of thin filopodia in motility and morphogenesis. Exp. Cell Res 253:296-301, 2000.

McClay, D.R., Peterson, R., Range, R., Winter-Vann, A., and Ferkowicz, M. A micromere induction signal is activated by ß-catenin and acts through Notch to initiate specification of secondary mesenchyme cells in the sea urchin embryo. Development 127, 5113-22, 2000.

Moser, T.L., Kenan, D.J., Ashley, T.A., Roy, J.A., Goodman, M.D., Misra, U.K., Cheek, D.J. and Pizzo, S.V. Endothelial Cell Surface F1-FO ATP Synthase is Active in ATP Synthesis and is Inhibited by Angiostatin. PNAS 98, 6656-6661, 2001.

Oliver, T.G., Grasfeder, L.L., Carroll, A.L., Kaiser, C., Gillingham, C.L., Lin, S.M., Wickramasinghe, R., Scott, M.P., Wechsler-Reya, R.J. Transcriptional profiling of the Sonic hedgehog response: a critical role for N-myc in proliferation of neuronal precursors. Proc Natl Acad Sci U S A. 100:7331-6, 2003.

Oliveri, P., Davidson, E.H., and McClay, D.R. Activation of pmar1 controls specification of micromeres in the sea urchin embryo. Dev. Biol. 258:32-43, 2003.

Parisi, M.P., Deng, W., Wang, Z., and Lin, H. The arrest gene is required for germline cyst formation during Drosophila oogenesis. Genesis (formerly Developmental Genetics) 29, 196-209, 2001.

Peng, Y-W, Senda, T., Hao, Y., Matsuno, K., and Wong, F. Ectopic synaptogenesis during retinal degeneration in the RCS rat. Neuroscience 119:813-820, 2003.

Peterson, R.E. and McClay, D.R. Primary mesenchyme cell patterning during the early stages following ingression. Dev. Biol. 254:68-78, 2003.

Ross, A. J., Tilmann, C., Yao, H., MacLaughlin, D. and Capel, B. AMH induces mesonephric cell migration in XX gonads. Mol. Cell Endocrinol. 211, 1-7, 2003.

Schagat, T. and Wright, J.R. Surfactant protein A enhances alveolar macrophage phagocytosis of apoptotic neutrophils. J. Immunol. 166:2727-2733, 2001.

Schmahl, J., Eicher, E.M., Washburn, L.L. and Capel, B. Sry induces cell proliferation in the mouse gonad. Development 127:65-73, 2000.

Schmahl, J. and Capel, B. Cell proliferation is necessary for the determination of male fate in the gonad. Developmental Biology, 258: 264-76, 2003.

Schmahl, J. and Capel, B. Colocalization of WT1 and cell proliferation revels conserved mechanisms in temperature-dependent sex determination. Genesis 35: 193-201, 2003.

Scott, D.B., Blanpied, T., Swanson, G., Zhang, C., and Ehlers, M.D. An NMDA Receptor ER Retention Signal Regulated by Phosphorylation and Alternative Splicing. J. Neurosci. (21) 3063-3072, 2001.

Sherwood, D.R. and McClay, D.R. Notch signaling regulates the position of the ectoderm-endoderm boundary in the sea urchin embryo. Development 128:2221-2232, 2001.

Shin, J.-S., Gao, Z., and Abraham, S.N. Involvement of Cellular Caveolae in Bacterial Entry into Mast Cells. Science 289: 782-785, 2000.

Silverstone, A.L., Jung, H.-S., Dill, A., Kawaide, H., Kamiya, Y., and Sun, T.-p. Repressing a repressor: gibberellin-induced rapid reduction of the RGA protein in Arabidopsis. Plant Cell 13, 1555-1565, 2001.

Speck, O., Hughes, S.C., Noren, N.K., Kulikauskas, R.M., and Fehon, R.G. Moesin functions antagonistically to the Rho pathway to maintain epithelial integrity. Nature 421, 83-87, 2003.

Swenson, K.I., Winkler, K.E., and Means, A.R. A new identity for MLK3 as an NIMA-related, cell cycle-regulated kinase that is localized near centrosomes and influences microtubule organization. Mol. Biol. Cell 14, 156-172, 2003.

Ward, K., Hoyle, C., Brennan, J., Dandonneau, M. Alldus, G., Capel, B., and Swain, A. Endothelial and steroidogenic cell migration are regulated by WNT4 in the developing mammalian gonad. Development, 130:3663-3670, 2003.

Ward, R.E.I., Schweizer, L., Lamb, R.S., and Fehon, R.G. The FERM domain of Drosophila Coracle, a cytoplasmic component of the septate junction, provides functions essential for embryonic development and imaginal cell proliferation. Genetics, 159, 219-228, 2001.

Yao, H. H-C-, Tilmann, C., Zhao, G-C, and Capel, B. The Battle of the Sexes: Opposing Pathways in Sex Determination. in The Genetics and Biology of Sex Determination. Novartis Foundation Symposium 244: 187-206, 2002.

Yao, H. H-C. and Capel, B. In vitro disruption of desert hedgehog signaling reveals independent cellular pathways during testis organogenesis. Developmental Biology, 246: 356-365, 2002.

Yao, H. H-C., Whoriskey, W., and Capel, B. Desert hedgehog/Patched1 signaling specifies fetal Leydig cell fate in testis organogenesis. Genes and Development 16: 1433-1440, 2002.

Yao, H.H-C., DiNapoli, L, and Capel, B. Meiotic germ cells antagonize mesonephric cell migration and testis cord formation. Development 130, 5895-5902, 2003.

Zhang, N., Guo, J., and He, Y.W. Lymphocyte accumulation in the spleen of retinoic acid receptor-related orphan receptor gamma deficient mice. J. Immunol. 171:1667-1675, 2003.

Antic, D., Lu, N., and Keene, J.D. ELAV tumor antigen, Hel-N1, by increases translation of neurofilament M mRNA and induces formation of neurites in human teratocarcinoma cells. Genes & Development 13: 449-461, 1999.

Atasoy, U., Watson, J., and Keene, J.D. ELAV protein HuA (HuR) can redistribute between the nucleus and cytoplasm and is upregulated during serum stimulation and T cell activation. Journal of Cell Science 111:3145-3156, 1998.

Brahmajothi, M.V. and Campbell, D.L. Heterogeneous basal expression of nitric oxide synthase and superoxide dismutase isoforms in mammalian heart : implications for mechanisms governing indirect and direct nitric oxide-related effects. Circ Res. Oct 1;85(7):575-87, 1999.

Brahmajothi, M.V., Strauss, H.C., Rasmusson, R.L., Morales, M.J., Nerbonne, J., Trimmer, J.S., and Campbell, D.L. Distinct transient outward potassium current (Ito) phenotypes and distribution of fast-inactivating potassium channel alpha subunits in ferret left ventricular and endocardial myocytes. J Gen. Physiol. 113: 581-600, 1999.

Brennan, J., Karl, J., Martineau, J., Nordqvist, K., Schmahl, J., Tilmann, C., Ung, K., and Capel, B. Sry and the Testis: Molecular Pathways of Organogenesis. The Journal of Experimental Zoology 281: 494-500, 1998.

Capel, B., Albrecht, K.H., Washburn, L,. and Eicher, E.M. Migration of mesonephric cells into the mammalian gonad depends on Sry. Mechanisms of Development 84: 127-131, 1999.

Ford, L.P., Watson, J., Keene, J.D. and Wilusz, J. ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system. Genes & Development 13: 188-201, 1999.

Hertzler, P.H. and McClay, D.R. SU2, an epithelial integrin that binds laminin in the sea urchin embryo. Dev. Biol. 207: 1-13, 1999.

Kardon, G. Muscle and tendon morphogenesis in the avian hind limb. Development 125:4019-4032, 1998.

Karl, J. and Capel, B. Sertoli cells of the mouse testis originate from the coelomic epithelium. Developmental Biology 203: 323-333, 1998.

Keene, J.D. Invited Commentary: Why is Hu Where? Shuttling of Early-Response Gene Messenger RNA Subsets. Proceedings of the National Academy of Sciences (USA) 96: 5-7, 1999.

LaJeunesse, D.R., McCartney, B.M., and Fehon, R.G. Structural analysis of Drosophila Merlin reveals functional domains important for growth control and subcellular localization. J. Cell Biol. 141, 1589-1599, 1998.

Lamb, R.S., Ward, R.E., Schweizer, L., and Fehon, R.G. Drosophila coracle, a member of the protein 4.1 superfamily, has essential structural functions in the septate junctions and developmental functions in embryonic and adult epithelial cells. Mol. Biol. Cell 9, 3505-3519, 1998.

Logan, C.Y. and McClay, D.R. The lineages that give rise to the endoderm and mesoderm in the sea urchin embryo. Cell Fate and Lineage Determination (S. Moody, Ed). Academic Press, New York. pp. 41-58, 1998.

Logan, C.Y., Miller, J.R., Ferkowica, M.J., and McClay, D.R. Nuclear ß-catenin is required to specify vegetal cell fates in the sea urchin embryo. Development 126: 345-357, 1999.

Mannon, R.B., Kotzin, B.L., Nataraj, C., Ferri, K., Roper, E., Kurlander, R.J., and Coffman, T.M. Downregulation of T cell receptor expression by CD8+ lymphocytes in kidney allografts. J Clin Invest 101(11):2517-2527, 1998.

Mannon, P.J., Kanungo, A., Mannon, R.B., and Ludwig, K.A. Peptide YY/Neuropeptide Y Y1 receptor expression in the epithelium and mucosal nerves of the human colon. Regulatory Peptides83, 11-19, 1999.

Matese, J.C. and McClay, D.R. Cortical Granule exocytosis is triggered by different thresholds of calcium during fertilization in sea urchin eggs. Zygote 6, 55-64, 1998.

McClay, D.R. and Hertzler, P.H. Quantitative measurement of cell adhesiveness. Current Protocols in Cell Biology. John Wiley, 1999.

McClay, D.R. The role of thin filopodia in motility and morphogenesis. Exp. Cell Res 253:296-301, 2000.

McHeyzer-Williams, L.J., Fanelli Panus, J., Mikszta, J.A., and McHeyzer-Williams, M.G. Evolution of antigen-specific T cell receptors in vivo: Pre-immune and antigen-driven selection of preferred CDR3 motifs. J. Exp. Med. 189 (11):1823-1837, 1999.

Sherwood, D.R. and McClay, D.R. LvNotch signaling mediates secondary mesenchyme specification in the sea urchin embryo. Development 126: 1703-1713, 1999.

Tilmann, C. and Capel, B. Mesonephric cell migration induces testis cord formation and Sertoli cell differentiation in the mammalian gonad. Development 126: 2883-2890, 1999.

Tschantz, W.R., Zhang, L., and Casey, P.J. Cloning, Expression and Cellular Localization of a Human Prenylcysteine Lyase. JBC 274, 35802-9, 1999.

Ward, R.E.I., Lamb, R.S., and Fehon, R.G. A conserved functional domain of Drosophila Coracle is required for localization at the septate junction and has membrane-organizing activity. J. Cell Biol. 140, 1463-1473, 1998.