Image processing, visualization and analysis


Image analysis workstations(Specifications)

FFSC Workstation in 4226 French Family Science Center
  • Zeiss AIM 4.2 software (Zeiss 510 confocal)
  • LAS AF lite (Leica SP5 confocal and TIRF)
  • Zeiss LSM 3.99 (old Zeiss 410 confocal)
  • MetaMorph basic 7.5 (system ID 32672)
  • Huygens SVI deconvolution software
  • Volocity
  • Photoshop CS2
  • ImageJ
  • Excel 2003
  • CD and DVD burner
  • FireWire and USB connections
 LSRC Workstation in C142 LSRC
  • MetaMorph premier 7.5 (system ID 32331)
  • LAS AF (Leica SP5 confocal and TIRF)
  • Zeiss LSM Image Browser (Zeiss 510 confocal)
  • Photoshop CS2
  • ImageJ
  • Excel 2003
  • CD and DVD burner
  • FireWire and USB connections

Information and help with . . .


Deconvolution
3D Visualization
Image Quantification

Software for your own computer

imageJ
 Image J
Free software for image analysis, a Java based version of NIH image, versatile and many plugins are available. Available for Mac OS X and 9, Linux and PC. ImageJ download | ImageJ plugins| ImageJ documentation
zeiss image browser
 Zeiss LSM Image Browser
Free software for viewing files acquired on the Zeiss confocals. PC only. Download image browser 4.0 (5 MB)
leica las af lite
 Leica LAS AF lite
Free version of the Leica confocal LAS AF software for your own computer. PC only. Download version 1.7.0 (58 MB)
Photoshop
Probably already available in your lab, can do almost anything but make sure you know what you are doing to your data. Some tips are here. GIMP is an open-source, free equivalent of photoshop for Mac, PC and Linux. .
irfanview
 Irfanview
Free program that can open a large variety of image file formats. PC only.
quicktime
 Quicktime
Versatile program that is useful for playing movies.
firefox
 Firefox
This web browser is recommended for using the LMCF website (virtually all others should work as well). It is available for PC, Mac and Linux.